| DNA Analysis Software (Downloads) | |
| the Java based Molecular Biologist's Workbench. | |
| a tool for working with and managing nucleotide sequences in multiple formats. | |
| a software for chromatogram files created by sequencers. | |
| DNA Sequence Polymorphism, is a software package for the analysis of nucleotide polymorphism from aligned DNA sequence data. | |
| a compact, easy to use DNA analysis program, ideal for small-scale sequencing projects. | |
| a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. | |
| (Artemis Comparison Tool) is a DNA sequence comparison viewer based on Artemis. | |
| Genetic Data Analysis software | |
| the industry standard software for DNA sequence analysis. | |
| The ultimate thermodynamic modelling spreadsheet for Excel | |
| be useful in the detection of duplication events in genomes, tracking the "footprints" of evolution, as well as displaying the genetic maps and other aspects of comparative genetics. | |
| allows to visualize genescan files (.fsa format from ABI PRISM sequencers) and to view the exact peak size. | |
| a stand-alone software tool developed by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases. | |
| an integrated DNA/Protein analysis tool package for molecular biology/biotech researchers. | |
| allows graphic manipulation of DNA sequences and sophisticated plasmid drawing options. | |
| a DNA sequence comparison tool and graphical user interface (GUI) viewer implemented in Perl/Tk. | |
| a genome annotation viewer and editor | |
| a tool for SNP Search and downloading with local management | |
| SSRHunter 1.3 Simple Sequence Repeat Search tool | |
| Internet Contig Explorer | |
| DNA analysis program | |
| DNA sequence analysis program | |
| The free Sequence Scanner Software enables you to view, edit, print and export sequence data generated using the Applied Biosystems Genetic Analyzers. | |
| a program for sequence assembly, contig editing, and mutation detection, available for Windows and Mac OS X. | |
| an application for Win95/Win98/Win NT for analysis of nucleotide sequences. | |
| tool for alignment, SNP identification, and PHRAP evaluation. | |
| A graphic tool to visualize DNA sequences. | |
| software for DNA cloning, sequence analysis and visualisation, | |
| Stand alone Chromatogram Editor with Mutation Detection | |
| Tool shows the proportions between nucleotides in a DNA sequence | |
| Tool will list all chromatogram files (SCF, ABI, AB1, AB) in the current folder. | |
| Nucleotide Sequence Analyzer | |
| This program is designated to manage microsatellite data | |
| e-Workbench for "databasing", comparative genome analysis. | |
| Integrated Genome Browser | |
| software for automated gene annotation and functional classification | |
| DNA sequence editor and analysis package | |
| Circular and linear interactive genome visualisation. | |
| Java application used to display SNPs in a genetic context. | |
| NCBI Genome Workbench. | |
| A software tool for discovering transcription factor binding motifs. | |
| Software tool designed to find repeats, from 3 bp to 64 bp length, in circular genomes | |
| Auxiliary DNA Software. | |
| Software for DNA sequence assembly, DNA sequence analysis etc. | |
| A sequence analysis tool. | |
| DNA Sequence Contig Assembler Software | |
| An open source, platform independent tool for genomic data | |
| RNA Analysis Software (Download) | |
| an integrated program for RNA secondary structure calculation and analysis under 32-bit Microsoft Windows | |
| a Windows program for the prediction and analysis of RNA secondary structure. | |
| a user-friendly, portable, GUI program for producing publication-quality secondary structure drawings of RNA molecules. | |
| a tool for drawing RNA secondary structures in molecular biology. | |
| program for inferring RNA secondary structure using the comparative method. | |
| a Java applet for viewing RNA secondary structures and linking to multiple computational backends. | |
| programs for the prediction and comparison of RNA secondary structures. | |
| a Java based suite of tools for the creation, annotation and display of RNA secondary structure diagrams. | |
| a new XML web service and web application program for visualizing RNA secondary structures with pseudoknots. | |
| Researchers use the OligoEngine platform to design sequences and purchase oligos, | |
| RNA/DNA folding predictions including pseudoknots and entangled helices | |
| a tool for folding RNA secondary structures, including the class of simple recursive pseudoknots. | |
| abstraction maps structures to a tree-like domain of shapes | |
| an algorithm for finding genomic targets for microRNAs | |
| program for predicting structurally conserved and thermodynamically stable RNA secondary structures in multiple sequence alignments. | |
| a simple software tools that enables to display all secondary structures of a family of RNA molecules. | |
| A utility for collecting statistics from aligned and structurally annotated RNA sequences. | |
| software for RNA analysis | |
| A Design and Visualization Tool for RNA Secondary Structure. | |
| An extension of DNA Baser, specialized in processing rRNA sequences. | |
| highly effective, target specific siRNA online design site. | |
| a program for improved detection of transfer RNA genes in genomic sequence. | |
| 3D Molecular Modeling Software (Download) | |
| an excellent and free molecular viewer. | |
| a molecular visualization software adapted from the program RasMol | |
| combines state of the art molecular graphics with a full range of Windows desktop integration tools. | |
| a fully Windows integrated, 3D molecular renderer. | |
| reads PDB files or alignment files directly from the database | |
| view and display 3D ICM graphical slides and animations interactively inside Microsoft PowerPoint and web browsers | |
| is designed for the visualization and analysis of biological systems such as proteins, nucleic acids, lipid bilayer assemblies, etc. | |
| a helper application for your web browser that allows you to view 3-dimensional structures from NCBI's Entrez retrieval service. | |
| interrogate the 3-dimensional structure of biological macromolecules as found in the Protein Data Bank (PDB) using query and display tools | |
| Desktop Molecular Modeller ( DTMM ) is a simple-to-use molecular modelling program . | |
| a tool for the visualization and analysis of molecular structures and their chemical properties. | |
| creates three-dimensional, photo-realistic images using a rendering technique called ray-tracing. | |
| a custom unofficial version of POV-Ray with a lot of additional features. | |
| molecular modelling program. | |
| graphics file converter that reads Brookhaven Protein Data Bank format files and produces a ready-to-render input file for the Persistence of Vision ray tracer (POV-Ray). | |
| a chemical visualization and illustration program with a new graphic interface. | |
| a MS-Windows version of the current release of ORTEP-III (1.0.3). | |
| a versatile crystallographic tool implementing a large variety of standard geometrical calculations | |
| a 3D vector display program which shows "kinemage" graphics. | |
| prepares molecular kinemages (input files for Mage & KiNG) from PDB-format coordinate files | |
| an interactive system for three-dimensional vector graphics. | |
| an application that provides a user friendly interface allowing to analyze several proteins at the same time | |
| an editor for molecules that allows the input of chemical structures in a very comfortable way. | |
| Java3D Molecular Visualisation System | |
| a molecular viewer, animator, analyzer, and MOPAC reaction path converter. | |
| an integrated high quality system for building and modelling molecules (Mopac and Iconc are included) and the system drives PC GAMESS and Tinker. | |
| will work in stand alone mode or under Oscail and will use Tinker Files if Tinker has been installed | |
| molecular modeling software | |
| molecular modeling and visualization program | |
| full-featured molecular modeling and visualization tool designed for Windows. | |
| Convert two-dimensional structures from ACD/ChemSketch into their three-dimensional | |
| molecular visualization system on an OPEN-SOURCE foundation. | |
| a program for viewing molecular structures and animating molecular trajectories. | |
| free software for visualizing the three-dimensional structures of protein, DNA, and RNA macromolecules | |
| a highly extensible, interactive molecular graphics program. | |
| a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry. | |
| It has been specially designed to focus solely on the ?, ^ and ? angles. | |
| A single, integrated application for your desktop * Hand optimized 3D for complex molecules | |
| view chemical structures from within popular Web browsers, | |
| is available for free and contains all the functions you need to explore a macromolecular structure interactively. | |
| a free program for protein structure model-building, visualization, validation and analysis ... | |
| a versatile package for the analysis, rebuilding, and visualization of three-dimensional nucleic acid structures, based on a standard reference frame | |
| A molecular modeling, graphics, and drug design program | |
| a program for the macromolecular structure visualization on the Windows platform | |
| a free program for visualizing and manipulating molecules. | |
| a suite of freeware and shareware tools for automating work of rendering and animating molecules | |
| 3D-Graphics program for Molecular Modeling and Visualization of Quantum Chemical Calculations | |
| It's the evolution of the well known VEGA OpenGL package and includes several new features and enhancements making your research jobs very easy. | |
| a GTK based program for the display and manipulation of isolated molecules and periodic systems | |
| an extensible object oriented class library, written in C++ for representing the 3-dimensional structure of biological macromolecules. | |
| open source (GPL), interactive, high quality molecular visualization system | |
| programs for molecular modeling | |
| BALLView 1.3 | standalone molecular modeling and visualization application |
| Software to prepare and present structure annotations containing formatted text, graphics, sequence data, and interactive molecular views | |
| Molecular visualization tool. | |
| User friendly PDB (Protein Data Bank) file editor | |
| A Molecular Modelling suite for drug design. | |
| Protein Data Bank Viewer. | |
| An advanced molecular editor. | |
| An open source workbench for chemo- and bioinformatics. | |
| A molecular graphics program. | |
| Molecular Viewer Applet. | |
| Free Organic Chemistry Analysis and Visualisation Tool | |
| A software tool that allows to derive 3D pharmacophores from structural data of macromolecule/ligand complexes. | |
| A suite of automated docking tools | |
| 3D Chemical Visualization and Decision Support. | |
| Virtual Screening software for Computational Drug Discovery. | |
| Add Proteins and DNA in 3D stereoscopic viewer | |
| Software for molecular visualisation. | |
| software package that integrates modeling, crystallography and NMR spectroscopy. Freeware product for presentation of molecules. | |
| A Public Domain Molecular Modeling Software. | |
| Protein Analysis Software (Download) | |
| ANalyse THE PROTeins software. | |
| Protein Sequence Analysis And Modelling | |
| a graphical Viewer and editor for Helical Membrane Protein Topologies | |
| Membrane Protein Explorer | |
| a tool for visualization and manipulation of complex interaction networks. | |
| for visualizing large-scale protein interaction networks. | |
| General Protein/Mass Analysis for Windows | |
| Systematic Tailored Orf-data Retrieval & Management | |
| Protein Interactions VisualizatiOn Tool | |
| A versatile tool for the analysis of aminoacid sequences. | |
| a Java-application for constructing multiple protein sequence alignments from regions of high similarity. | |
| An advanced workbench for protein analysis. | |
| a SmartTag and Add-In solution for the Microsoft Office applications. | |
| The first computational system for predicting protein submitochondria locations from its primary sequence. | |
| The Protein Coverage Summarizer | |
| Tools and software libraries for proteomics data analysis. | |
| Hydrogen Bond Analysis Tool. | |
| A tree viewer for hierarchical clusterings of proteins in the human Genome. | |
| Biochemical Engineering | |
| Bioreactor Design software | |
| Fermentor Control Program | |
| Program for Dynamic Simulation of Fed-Batch Penicillin Production | |
| tool for process and product development engineers | |
| PCR | |
| Unique and innovative primer design studio | |
| A comprehensive primer design tool to design | |
| Oligo 6.71 Demo researchers in PCR and related technologies software | |
| Software for pASK-IBA and pPR-IBA Vectors | |
| tool to efficiently design hundreds of specific oligos | |
| Beacon Designer 5.10 Demo helps design successful molecular beacon | |
| Free! Primer Analysis Software | |
| to facilitate the design of PCR primers | |
| Electronic PCR (e-PCR) is computational procedure that is used to identify sequence tagged sites(STSs), within DNA sequences. | |
| a free software for design PCR primers | |
| a multi-user, multi-platform oligonucleotide cataloguing application | |
| a free, open-source GUI application that designs primers for PCR. | |
| software for seeking in a collection of primers | |
| developed to rapidly screen previously selected PCR primers | |
| a desktop tool to design primers for site directed mutagenesis kits. | |
| Java Application for automatical primer design. | |
| a PCR primer design tool that completely automates the primer design process. | |
| Absolute estimation of initial concentrations of amplicon in a real-time RT-PCR process | |
| Sequence Format Conversion | |
| A powerful sketchpad to decorate your sequence. | |
| Visual Sequence Editor | |
| tool for the conversion of nucleic acid and amino acid sequence alignments | |
| a free sequence file format conversion utility by GeneStudio, Inc. | |
| a modern suite of molecular biology applications for the Windows platform built on our sequence format conversion engine, SeqVerter | |
| a program for processing nucleotide sequences alignment made with FASTA and BLAST alignment tools. | |
| creates the reverse complement of a DNA sequence | |
| code for handling and manipulating biological sequences. | |
| a fast and efficient compression algorithm for DNA sequences | |
| Advanced Protein Sequence Converter | |
| a conversion program for bioinformatics. | |
| a command line program designed to extract the structure information (.pdb) from the xml structure files. | |
| Sequence Manager And Converter . | |
| a tool for converting DNA or protein data file to formats usable in major analytical software. | |
| software tools for merging muti-files in a single file. Tool will split a multi-FASTA file in multiple standard FASTA files. | |
| Utility to convert the binary file format from an ABI PRISM TM 377 DNA Sequencer to an xml file | |
| automatic ABI to FASTA Converter | |
| a freeware that can convert GenBank (gb/gbk) file format to FASTA format. | |
| A Batch DNA Sample Converter. | |
| Phylogenetic Analysis | |
| Phylogenetic Analysis Using Parsimony | |
| Paup Windows Interface software | |
| the PHYLogeny Inference Package | |
| a simple program for displaying phylogenies | |
| an experimental program for comparing gene and species trees. | |
| NEXUS Data Editor) is a program to create and edit NEXUS format data files | |
| an experimental program for comparing host and parasite trees | |
| a freeware utilities package that works with the phylogenetic inference package Phylip | |
| a computer program to reconstruct phylogenetic trees from molecular sequence data by maximum likelihood. | |
| a Java tool for the visualization of annotated phylogenetic trees | |
| a software package developed primarily for the construction and drawing of phylogenetic trees | |
| program for analysing evolutionary trees | |
| a tree drawing program able to draw any phylogenetic tree | |
| Molecular Evolutionary Genetics Analysis | |
| Selection on Amino Acid Properties | |
| software for evolutionary biology | |
| Analysis Library A Java library for molecular evolution and phylogenetics | |
| a collection of command line programs written in Java to access some selected features in PAL | |
| application for computing evolutionary networks from molecular sequence data. | |
| a Java computer program to estimate gene genealogies including multifurcations and/or reticulations (i.e. networks). | |
| a program for the calculation of the statistics and associated P-values for the nested clade analysis (NCA) developed by Templeton and collaborators. | |
| Recombination detection program | |
| a distance based phylogeny reconstruction algorithm. | |
| an integrated environment for the manipulation and phylogenetic analysis | |
| Tree and Reticulogram reconstruction | |
| a computer package for PCs which estimates and tests gene diversities and differentiation statistics from codominant genetic markers | |
| A tool for the construction of large phylogenetic trees based on profile distances | |
| a new distance-based clustering method, triplet clustering algorithm | |
| tests of differential diversification rates | |
| Phylogenetic Visualization tool | |
| computes phylogenetic trees from molecular sequences. | |
| a software package for PHylogenetics And Sequence Evolution | |
| Bayesian Analysis in Molecular Biology and Evolution | |
| phylogenetic model averaging | |
| a windows and linux interface for modeltest. | |
| determining the optimal phylogenetic supertree | |
| to conduct the Test For Serial Independence (TFSI) on continuously valued characters and the Runs Test on discretely valued characters (Abouheif 1999) | |
| a java implementation of the evolutionary trace method | |
| program for making phylogenetic trees starting from sequence data | |
| implements some straight-forward birth-death models for simulating phylogenies | |
| cross-platform program for Bayesian MCMC analysis of molecular sequences | |
| Macroevolutionary Analysis & Simulation | |
| Compare phylogenetic evolutionary trees interactively and automatically | |
| display a phylogenetic tree in several different styles | |
| a comprehensive phylogenetic tree visualization and manipulation software | |
| a computer program that simulates the branching of an evolutionary tree | |
| Genealogy Interval Explorer | |
| Phylogenetics, Evolutionary Biology, and Bioinformatics in a moduLar Environment | |
| a program for building and displaying phylogenetic trees | |
| a drawing tool for creating phylogenetic trees. | |
| a program for the Bayesian estimation of phylogeny, | |
| software for generating evolutionary trees and networks , | |
| Phylogenetic Data Editor | |
| software for Parsimony ratchet analyses with PAUP. | |
| provides an easy and fast access to cophylogenetic analyses | |
| An interactive viewer for large phylogenetic trees | |
| A graphical editor for phylogenetic trees. | |
| Primer design and sequence statistics for phylogenetic DNA data sets | |
| A tool to aid in the classification & evolutionary relationships of protein sequences. | |
| Dnamic graphics and annotations for phylogenetic or classification trees analyses . | |
| An editor for large phylogenetic trees written in Java. | |
| A graphycal software to perform phylogenetic analyses. | |
| An application for comparing two trees using coupled interaction. | |
| An application that allows to build, visualize and customize phylogenetic trees. | |
| A graphical viewer of phylogenetic trees. | |
| A program for qualitative analysis of sets of trees. | |
| Plasmid Map | |
| Virtual cloning laboratory. | |
| Scientific software for the molecular biologist | |
| visual, intuitive and integrated molecular cloning software | |
| solution for fast and easy plasmid map drawing,restriction site mapping, and virtural cloning | |
| tool for drawing publication and vector catalog quality maps | |
| A Plasmid Editor | |
| DNA plasmid drawing software | |
| A plasmid drawing software. | |
| a DNA mapping program for Mac OS | |
| Circular Genome Viewer | |
| A free, cross-platform PLAsmid MAnipulation program | |
| Online Tools | |
| automatically generates and annotates plasmid maps using only the plasmid DNA sequence as input. | |
| Online Plasmid map drawing | |
| Draw plasmid map tool. | |
| Free online plasmid draw/plotter program. | |
| Image Analysis | |
| a free image processing and analysis program | |
| Java image processing program | |
| An image processing package. | |
| PC software package, developed for analysis of genetic fingerprints such as RFLP, RAPD and AFLP | |
| Image analysis software for Gel Electrophoresis samples | |
| the Windows version of Scion Image, which is in turn a version of the popular Macintosh program, NIH Image, written at the National Institutes of Health. | |
| a viewer for Papyrus / DICOM images (the actual standard for viewing, storing acquiring, communicating radiological and non-radiological medical images). | |
| visualize gels and related data obtained through the use of the full version of ImageMaster 2D Platinum or Melanie by colleagues. I | |
| software range for the fast and accurate analysis of 1D gel images. | |
| software to analyze a wide variety of material including polyacrylamide and agarose gels | |
| digitizing software converts an image file showing a graph or map, into numbers. | |
| for digitization of orthogonal graphs | |
| for automatic processing of spectra and also any plots having strongly expressed local maxima (peaks). | |
| A feature-filled, user friendly software product, provided free of charge to scientists | |
| a program for digitizing graphs and plots. | |
| application that makes it easy to acquire, measure, and analyze digital images | |
| software replaces a digitizer tablet. | |
| software for quantification of labeled bacteria by automated image analysis. | |
| Display a grid over your image. | |
| free open source software for analysis, processing and 3D rendering of multi dimensional microscopy images. | |
| Program for making publication-quality 2D and 3D scientific graphs. | |
| Cross-Platform Advanced Thin Layer and Gel Analysis Software. | |
| 1D gel electrophoresis analysis software . | |
| Software for Tissue MicroArrays (TMA's). | |
| Software for the analysis of DNA fingerprints. | |
| A miniature utility for gel image analysis. | |
| 3D/4D/5D Image Visualization & Analysis System for Bioimages | |
| 3D software tool. | |
| Sequence Alignment Analysis | |
| genome & proteome research tools | |
| Multiple Alignment Construction & Analysis Workbench | |
| multiple alignment program for DNA or proteins. | |
| Compares a protein sequence to another protein sequence or to a protein database, or a DNA sequence to another DNA sequence or a DNA library. | |
| A Full Featured Multiple Sequence Alignment Editor, Analyser and Shading Utility for Windows. | |
| The Basic Local Alignment Search Tool | |
| a biological sequence editor and analysis program | |
| a biological sequence alignment editor written for Windows 95/98/NT/2000/XP. | |
| Data Analysis and Molecular Biology and Evolution software | |
| a graphical multiple sequence alignment editor | |
| a multiple alignment editor written entirely in java | |
| Bioinformatics software | |
| a revolutionary new Windows application for DNA and protein sequence analysis. | |
| a freeware program, allows scientists to study and analyze biological molecules. | |
| an innovative software tool that provides helpful gene analysis capabilities in an intuitive and easy-to-use interface. | |
| program for sequence editing and population genetics (mol/evol) analysis. | |
| The Sequence Manipulation Suite | |
| A fully developed set of DNA sequence assembly (Gap4), editing and analysis tools | |
| a dynamic, flexible open source platform for the integration of bioinformatics software tools and databases. | |
| a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements) | |
| Sequence analysis and data management software | |
| an acronym, stands for SEquence analysis using WEb Resources. | |
| a Windows graphical front-end for NCBI BLAST. | |
| A Graphical Tool for Sequence Feature Visualization and Comparison | |
| a Java front end to many useful bioinformatics tools | |
| Blast local tools | |
| local pairwise sequence alignment software | |
| sequence analysis tools | |
| tools for sequence analysis. | |
| bioinformatics analyses workbench. | |
| a multiple sequence alignment program. | |
| a multiple sequence alignment program. | |
| graphical program for visualizing local alignments between two sequences | |
| Bioinformatics Algorithms in Java | |
| Multiple Sequence Alignment Interactive Program | |
| Genome Alignment Software | |
| tool for viewing and manipulating the output from pairwise alignment programs | |
| DNA local alignment tool | |
| Molecular Structure Viewer and Colour INteractive Editor for Multiple Alignments | |
| Bioinformatics Toolbox for analysis of biomedical data | |
| a software for DNA and amino acid editing | |
| multiple alignment software | |
| Multiple alignment and editor software. | |
| tools for basic and advanced analyses of nucleotide and protein sequences. | |
| software to explore BLAST results graphically | |
| highly flexible framework for designing biomolecular viewers. | |
| a bioinformatics software tool for analyzing DNA and protein sequences. | |
| statistical and evolutionary analysis of multiple sequence alignments | |
| A visualization tool to simultaneously integrate and analyze multiple types of genomic data. | |
| The European Molecular Biology Open Software Suite | |
| A Python platform for structural bioinformatics. | |
| genomics Workbench , a Java-based open-source platform for integrated genomics. | |
| Structure and Sequence Alignment Software. | |
| Integrated Bioinformatics Tools. | |
| A tool for generating annotated multiple sequence alignments. | |
| Bio-Chip | |
| Process fluorescent images of microarrays | |
| Perform a variety of types of cluster analysis and other types of processing on large microarray datasets. | |
| Graphically browse results of clustering and other analyses from Cluster | |
| provides high performance robotic control of microarrayer robots | |
| software package for analysis and visualization of microarray data | |
| Java-based data-mining facility for cDNA or oligonucleiotide microarray databases | |
| programs for viewing and optimizing gene expression dendrograms | |
| DNA-Chip Analyzer (dChip) (www.dchip.org) is a Windows software package for probe-level and high-level analysis of Affymetrix gene expression microarrays and SNP microarrays | |
| Significance Analysis of Microarrays | |
| visualization and statistical analysis of DNA microarray gene expression data | |
| program for organizing, exploring, visualizing, and analyzing microarray data | |
| DNA Macroarrays Analysis Program | |
| expedient determination of the quality of multiple spotted DNA microarray experiments | |
| enhanced version of Cluster | |
| analytic tools for genomic data | |
| Gene Map Annotator and Pathway Profiler | |
| primary data entry, tracking, and reporting system. | |
| multi-channel image analysis tool for microarray images | |
| a normalization and filtering tool used to process the raw data output from Spotfinder | |
| main data analysis and visualization tool for microarray | |
| program for reordering and displaying expression array data. | |
| Viewer for Microarray Data in the PCL or CDT format | |
| EXpression Analyzer and DisplayER | |
| a program that computes gene specific oligonucleotides that are free of secondary structure for genome-scale oligonucleotide microarray construction. | |
| Bayesian Analysis of Gene Expression Levels (BAGEL): a program for the statistical analysis of spotted microarray data. | |
| a computer program for the analysis of temporal gene expression data. | |
| Gene Array Analyzer Software | |
| a statistical analysis program to identify differentially expressed genes from microarray data | |
| Statistical analysis is based on the single-factor ANalysis Of VAriance (ANOVA) | |
| toolkit for analyzing tabular data within the framework of rough set theory. | |
| tools for microarray | |
| a program for microarray image quantification | |
| a set of analysis tools using advanced algorithms to reveal the true structure of your gene expression data | |
| a program that compares heterologous microarray data sets, based on the number of common, differentially expressed genes. | |
| Microarray Image Analysis Software , | |
| MicroArray Genome Imaging & Clustering Tool. | |
| Add-In for Microsoft Excel, which is designed to handle the microarray data. | |
| application for analysing array-experiments. | |
| A workbench for visualization, analysis and storage of microarray data. | |
| Microarray Probe Designer. | |
| a software tool to extract gene expression modules from perturbational microarray data | |
| Software for gene expression microarray data analysis. | |
| Java application for microarray data analysis. | |
| An Excel plug-in that performs sparse canonical correlation analysis. | |
| Oligo Microarray Design and Analysis | |
| An application for significance analysis of microarrays using a parallelized algorithm. | |
| A Java program for analysis and visualization of Affymetrix GeneChip? data. | |
| Education | |
| the demonstration of Main Metabolic Pathways for PC | |
| Linear Pathway Simulator | |
| let them experiment with the simulation | |
| The Molecular Basis of Medicine | |
| Photosynthesis a tutorial program for photosynthesis | |
| a self-training program based on PBL (Problem-Based- Learning Pathway) built to simulate a molecular biology laboratory. | |
| Computer aided learning for quantitative genetics. | |
| computer programs for the teaching and learning of genetics. | |
| Cell Structure & Function education software. | |
| Digital Frog software | |
| Cell Tissue Body explorer. | |
| Education software for BIO | |
| Painlessly teach anyone he must-know details of how DNA works in 3D. | |
| equence Alignment Teacher. | |
| Animations and Graphics | |
| icons for scientific programs. | |
| Prescott, Harley, and Klein's Microbiology, 7/e | |
| Robert J. Brooker, Biology, 1st Edition | |
| biologically related images. | |
| From Japanese RIKEN Center for Developmental Biology | |
| Interesting Stuff | |
| a player for Conway's game of life | |
| Experience life and death in a window or as a screen saver! | |
| an entertaining plant breeding game | |
| to create impressive simulations of complex systems | |
| screen saver offers individuals a tremendous amount of variety | |
| a "screen saver" of images by Irving Geis | |
| Screen saver demonstrating DNA chain termination caused by Acyclovir | |
| converting DNA sequences into music. | |
| Molecular Probes Screensaver | |
| a distributed computing project | |
| This 3D screensaver shows real 3D models of biological molecules in dynamics | |
| Inside the Cell 3D screensaver will provide you with a unique opportunity to plunge into the very depths of the living organism | |
| a game about SNP and side effort | |
| Virtual Electron Microscope | |
| Microbiology Screensaver | |
| converts the text of a DNA or protein sequence to a MIDI file | |
| program that simulates bacteria-like organisms | |
| fills your screen with scrolling C/G/A/T | |
| artificial life simulation | |
| artificial life simulation | |
| Screen Saver. | |
| BRAINY SCREEN SAVER | |
| the software simulates in a visual fashion the processes involved in the evolution of unicellular organisms at nature, | |
| a Tcl/Tk application for turning DNA sequences into musical sequences | |
| Gaming software. | |
| Addictive puzzle game. | |
Softwares Used in Biotechnology and Molecular Biology Studies
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